Okay, wow, way to overwhelm the person who's not entirely comfortable in her own skin.

"One question at a time: The Flesh was being abused at the time. The Doctor worked to free it and to make sure everyone involved understood that had its own sentience. I downloaded the the information about the chemistry of the Flesh into my databanks. I wanted to try to recreate it as it was intended, rather than allowing it to become sentient."